Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp7Q8R1T1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Cts7-204ENSMUST00000225321 1257 ntBASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp7Q8R1T1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Gm16479-201ENSMUST00000121706 932 ntBASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Gm6222-202ENSMUST00000182143 629 ntBASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp7Q8R1T1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Gm12241-201ENSMUST00000118330 726 ntBASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Gm43758-201ENSMUST00000199500 367 ntBASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp7Q8R1T1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms