Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Syne4Q8CII8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.17■□□□□ 0.02
Syne4Q8CII8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Gm14726-201ENSMUST00000120623 896 ntBASIC15.17■□□□□ 0.02
Syne4Q8CII8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Gm28693-202ENSMUST00000190758 331 ntBASIC15.17■□□□□ 0.02
Syne4Q8CII8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.17■□□□□ 0.02
Syne4Q8CII8 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.17■□□□□ 0.02
Syne4Q8CII8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Syne4Q8CII8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Syne4Q8CII8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm24830-201ENSMUST00000102024 166 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm12176-201ENSMUST00000121420 875 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm13316-201ENSMUST00000140537 691 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm25890-201ENSMUST00000177643 165 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm22614-201ENSMUST00000178300 165 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm22042-201ENSMUST00000082989 165 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm26232-201ENSMUST00000083360 166 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm24136-201ENSMUST00000083374 165 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm26110-201ENSMUST00000083971 165 ntBASIC15.16■□□□□ 0.02
Syne4Q8CII8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Syne4Q8CII8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms