Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Gm10268-201ENSMUST00000085340 555 ntBASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip3Q8CHD8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Gm42693-201ENSMUST00000196779 631 ntBASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip3Q8CHD8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Gm11637-201ENSMUST00000120601 592 ntBASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Rab11fip3Q8CHD8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Gm23931-201ENSMUST00000103842 109 ntBASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Gm13123-201ENSMUST00000122173 492 ntBASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Gm10146-201ENSMUST00000072739 309 ntBASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Snora73a-201ENSMUST00000082453 205 ntBASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab11fip3Q8CHD8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms