Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Smc2Q8CG48 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Mir7684-201ENSMUST00000183858 60 ntBASIC15.46■□□□□ 0.07
Smc2Q8CG48 Mir8102-201ENSMUST00000184148 139 ntBASIC15.46■□□□□ 0.07
Smc2Q8CG48 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Gm5867-201ENSMUST00000063197 592 ntBASIC15.46■□□□□ 0.07
Smc2Q8CG48 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.46■□□□□ 0.07
Smc2Q8CG48 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.46■□□□□ 0.07
Smc2Q8CG48 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smc2Q8CG48 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smc2Q8CG48 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smc2Q8CG48 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smc2Q8CG48 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smc2Q8CG48 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smc2Q8CG48 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Smc2Q8CG48 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.46■□□□□ 0.06
Smc2Q8CG48 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gm27838-201ENSMUST00000184829 128 ntBASIC15.45■□□□□ 0.06
Smc2Q8CG48 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.45■□□□□ 0.06
Smc2Q8CG48 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.45■□□□□ 0.06
Smc2Q8CG48 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smc2Q8CG48 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.44■□□□□ 0.06
Smc2Q8CG48 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Gm9522-201ENSMUST00000182394 926 ntBASIC15.44■□□□□ 0.06
Smc2Q8CG48 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Gm20445-201ENSMUST00000061905 565 ntBASIC15.44■□□□□ 0.06
Smc2Q8CG48 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smc2Q8CG48 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc2Q8CG48 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc2Q8CG48 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc2Q8CG48 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smc2Q8CG48 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms