Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Gm30285-201ENSMUST00000214614 422 ntBASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rtp1Q8C8C1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Gm8959-201ENSMUST00000213150 571 ntBASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Gm5781-201ENSMUST00000219792 443 ntBASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rtp1Q8C8C1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Mir6927-201ENSMUST00000184494 71 ntBASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Gm8099-201ENSMUST00000200510 742 ntBASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rtp1Q8C8C1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Gm16479-201ENSMUST00000121706 932 ntBASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Gm24548-201ENSMUST00000158650 108 ntBASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Gm19163-201ENSMUST00000223313 780 ntBASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rtp1Q8C8C1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms