Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gm23935-201ENSMUST00000102303 57 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gm24270-201ENSMUST00000102326 57 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gm11543-201ENSMUST00000120758 370 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gm24245-201ENSMUST00000157318 57 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Gm18057-201ENSMUST00000208220 503 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Chchd1-203ENSMUST00000224633 557 ntBASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tsen54Q8C2A2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Gm11745-201ENSMUST00000121669 448 ntBASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Gm26308-201ENSMUST00000157768 69 ntBASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Gm18737-201ENSMUST00000173594 937 ntBASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tsen54Q8C2A2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Tsen54Q8C2A2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tsen54Q8C2A2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms