Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Slc5a7Q8BGY9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Mir698-201ENSMUST00000102164 109 ntBASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Gm17968-201ENSMUST00000194902 784 ntBASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.79□□□□□ -0.52
Slc5a7Q8BGY9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Mir874-201ENSMUST00000104769 76 ntBASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Slc5a7Q8BGY9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.77□□□□□ -0.52
Slc5a7Q8BGY9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc5a7Q8BGY9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms