Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh19Q80TF3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Gm29649-201ENSMUST00000185649 419 ntBASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Gm29608-201ENSMUST00000190444 463 ntBASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh19Q80TF3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm12403-201ENSMUST00000121384 959 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Gm6091-201ENSMUST00000098307 165 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdh19Q80TF3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Pcdh19Q80TF3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms