Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx55Q6ZPL9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx55Q6ZPL9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Gm43138-201ENSMUST00000199123 708 ntBASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Nsd1-205ENSMUST00000224693 852 ntBASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx55Q6ZPL9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Gm14017-201ENSMUST00000121934 386 ntBASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Gm24990-201ENSMUST00000157406 323 ntBASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.23■□□□□ 0.03
Ddx55Q6ZPL9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms