Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sp140Q6NSQ5 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Mir7684-201ENSMUST00000183858 60 ntBASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Mir8102-201ENSMUST00000184148 139 ntBASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sp140Q6NSQ5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Gm15321-201ENSMUST00000121290 288 ntBASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Gm9797-201ENSMUST00000052902 613 ntBASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sp140Q6NSQ5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms