Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.94■□□□□ 0.14
Col11a2Q64739 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col11a2Q64739 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Col11a2Q64739 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.93■□□□□ 0.14
Col11a2Q64739 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.93■□□□□ 0.14
Col11a2Q64739 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col11a2Q64739 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.93■□□□□ 0.14
Col11a2Q64739 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.93■□□□□ 0.14
Col11a2Q64739 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Col11a2Q64739 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.93■□□□□ 0.14
Col11a2Q64739 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Col11a2Q64739 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col11a2Q64739 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Gm12266-201ENSMUST00000120311 962 ntBASIC15.92■□□□□ 0.14
Col11a2Q64739 Gm13813-201ENSMUST00000120998 787 ntBASIC15.92■□□□□ 0.14
Col11a2Q64739 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Gm8365-201ENSMUST00000197334 648 ntBASIC15.92■□□□□ 0.14
Col11a2Q64739 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col11a2Q64739 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col11a2Q64739 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm12134-201ENSMUST00000122109 520 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm9540-201ENSMUST00000188230 478 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm45925-201ENSMUST00000218882 744 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col11a2Q64739 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm13611-201ENSMUST00000118269 318 ntBASIC15.91■□□□□ 0.14
Col11a2Q64739 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.91■□□□□ 0.14
Col11a2Q64739 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.91■□□□□ 0.14
Col11a2Q64739 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms