Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm44126-201ENSMUST00000204831 514 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Gm8566-201ENSMUST00000120174 465 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Gm23699-201ENSMUST00000158835 135 ntBASIC15.55■□□□□ 0.08
Scn9aQ62205 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Scn9aQ62205 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.55■□□□□ 0.08
Scn9aQ62205 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Scn9aQ62205 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.54■□□□□ 0.08
Scn9aQ62205 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.54■□□□□ 0.08
Scn9aQ62205 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.54■□□□□ 0.08
Scn9aQ62205 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Scn9aQ62205 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Scn9aQ62205 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.54■□□□□ 0.08
Scn9aQ62205 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Daam2-202ENSMUST00000224595 1926 ntBASIC15.54■□□□□ 0.08
Scn9aQ62205 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Scn9aQ62205 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Scn9aQ62205 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.54■□□□□ 0.08
Scn9aQ62205 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scn9aQ62205 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.54■□□□□ 0.08
Scn9aQ62205 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.53■□□□□ 0.08
Scn9aQ62205 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Scn9aQ62205 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Scn9aQ62205 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Scn9aQ62205 Gm8712-201ENSMUST00000221090 701 ntBASIC15.53■□□□□ 0.08
Scn9aQ62205 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Scn9aQ62205 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Scn9aQ62205 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.53■□□□□ 0.08
Scn9aQ62205 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.53■□□□□ 0.08
Scn9aQ62205 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.53■□□□□ 0.08
Scn9aQ62205 Gm9555-201ENSMUST00000200908 583 ntBASIC15.53■□□□□ 0.08
Scn9aQ62205 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.53■□□□□ 0.08
Scn9aQ62205 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Scn9aQ62205 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scn9aQ62205 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.53■□□□□ 0.08
Scn9aQ62205 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.52■□□□□ 0.08
Scn9aQ62205 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scn9aQ62205 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms