Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rai1Q61818 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rai1Q61818 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rai1Q61818 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Rai1Q61818 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rai1Q61818 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rai1Q61818 Gm12176-201ENSMUST00000121420 875 ntBASIC12.83□□□□□ -0.36
Rai1Q61818 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.83□□□□□ -0.36
Rai1Q61818 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.83□□□□□ -0.36
Rai1Q61818 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.83□□□□□ -0.36
Rai1Q61818 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rai1Q61818 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rai1Q61818 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rai1Q61818 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Gm38317-201ENSMUST00000195564 343 ntBASIC12.83□□□□□ -0.36
Rai1Q61818 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.83□□□□□ -0.36
Rai1Q61818 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.83□□□□□ -0.36
Rai1Q61818 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rai1Q61818 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.83□□□□□ -0.36
Rai1Q61818 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.83□□□□□ -0.36
Rai1Q61818 Gm23270-201ENSMUST00000104055 131 ntBASIC12.82□□□□□ -0.36
Rai1Q61818 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.82□□□□□ -0.36
Rai1Q61818 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.82□□□□□ -0.36
Rai1Q61818 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.82□□□□□ -0.36
Rai1Q61818 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.82□□□□□ -0.36
Rai1Q61818 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rai1Q61818 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rai1Q61818 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.82□□□□□ -0.36
Rai1Q61818 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.82□□□□□ -0.36
Rai1Q61818 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Gm17208-201ENSMUST00000168388 535 ntBASIC12.82□□□□□ -0.36
Rai1Q61818 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.82□□□□□ -0.36
Rai1Q61818 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rai1Q61818 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rai1Q61818 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rai1Q61818 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Gm14130-201ENSMUST00000118417 987 ntBASIC12.81□□□□□ -0.36
Rai1Q61818 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.81□□□□□ -0.36
Rai1Q61818 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.81□□□□□ -0.36
Rai1Q61818 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.81□□□□□ -0.36
Rai1Q61818 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.81□□□□□ -0.36
Rai1Q61818 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.81□□□□□ -0.36
Rai1Q61818 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rai1Q61818 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms