Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.63□□□□□ -0.39
Sox17Q61473 Gm18057-201ENSMUST00000208220 503 ntBASIC12.63□□□□□ -0.39
Sox17Q61473 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.63□□□□□ -0.39
Sox17Q61473 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.63□□□□□ -0.39
Sox17Q61473 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sox17Q61473 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sox17Q61473 Pck2-205ENSMUST00000226352 2784 ntBASIC12.63□□□□□ -0.39
Sox17Q61473 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox17Q61473 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox17Q61473 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox17Q61473 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.62□□□□□ -0.39
Sox17Q61473 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox17Q61473 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox17Q61473 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Sox17Q61473 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.62□□□□□ -0.39
Sox17Q61473 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Sox17Q61473 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Sox17Q61473 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox17Q61473 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Gm9727-201ENSMUST00000161387 555 ntBASIC12.62□□□□□ -0.39
Sox17Q61473 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.62□□□□□ -0.39
Sox17Q61473 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox17Q61473 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox17Q61473 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox17Q61473 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.62□□□□□ -0.39
Sox17Q61473 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox17Q61473 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox17Q61473 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox17Q61473 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox17Q61473 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox17Q61473 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Matn2-203ENSMUST00000226766 3252 ntBASIC12.62□□□□□ -0.39
Sox17Q61473 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Sox17Q61473 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox17Q61473 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox17Q61473 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox17Q61473 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox17Q61473 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.61□□□□□ -0.39
Sox17Q61473 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.61□□□□□ -0.39
Sox17Q61473 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox17Q61473 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.61□□□□□ -0.39
Sox17Q61473 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox17Q61473 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox17Q61473 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.61□□□□□ -0.39
Sox17Q61473 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.61□□□□□ -0.39
Sox17Q61473 Gm18737-201ENSMUST00000173594 937 ntBASIC12.61□□□□□ -0.39
Sox17Q61473 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.61□□□□□ -0.39
Sox17Q61473 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.61□□□□□ -0.39
Sox17Q61473 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sox17Q61473 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox17Q61473 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms