Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccne1Q61457 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccne1Q61457 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccne1Q61457 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Ccne1Q61457 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.44■□□□□ 0.38
Ccne1Q61457 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Gm11637-201ENSMUST00000120601 592 ntBASIC17.44■□□□□ 0.38
Ccne1Q61457 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccne1Q61457 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.44■□□□□ 0.38
Ccne1Q61457 Gm6621-201ENSMUST00000193251 772 ntBASIC17.44■□□□□ 0.38
Ccne1Q61457 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
Ccne1Q61457 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccne1Q61457 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccne1Q61457 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm22323-201ENSMUST00000103832 109 ntBASIC17.43■□□□□ 0.38
Ccne1Q61457 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm15236-201ENSMUST00000117309 379 ntBASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm2991-201ENSMUST00000173338 480 ntBASIC17.43■□□□□ 0.38
Ccne1Q61457 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm28693-202ENSMUST00000190758 331 ntBASIC17.43■□□□□ 0.38
Ccne1Q61457 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.43■□□□□ 0.38
Ccne1Q61457 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.43■□□□□ 0.38
Ccne1Q61457 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccne1Q61457 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccne1Q61457 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.42■□□□□ 0.38
Ccne1Q61457 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.42■□□□□ 0.38
Ccne1Q61457 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccne1Q61457 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccne1Q61457 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 139.8 ms