Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm18041-201ENSMUST00000218210 618 ntBASIC12.74□□□□□ -0.37
Ripk1Q60855 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ripk1Q60855 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.74□□□□□ -0.37
Ripk1Q60855 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ripk1Q60855 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ripk1Q60855 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ripk1Q60855 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.73□□□□□ -0.37
Ripk1Q60855 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Ripk1Q60855 Gm17795-201ENSMUST00000214505 757 ntBASIC12.73□□□□□ -0.37
Ripk1Q60855 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.73□□□□□ -0.37
Ripk1Q60855 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.73□□□□□ -0.37
Ripk1Q60855 Gm20445-201ENSMUST00000061905 565 ntBASIC12.73□□□□□ -0.37
Ripk1Q60855 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Ripk1Q60855 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ripk1Q60855 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ripk1Q60855 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.72□□□□□ -0.37
Ripk1Q60855 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.72□□□□□ -0.37
Ripk1Q60855 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.72□□□□□ -0.37
Ripk1Q60855 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.72□□□□□ -0.37
Ripk1Q60855 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.72□□□□□ -0.37
Ripk1Q60855 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Ripk1Q60855 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ripk1Q60855 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.71□□□□□ -0.37
Ripk1Q60855 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ripk1Q60855 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms