Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cnga4Q3UW12 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cnga4Q3UW12 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cnga4Q3UW12 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cnga4Q3UW12 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cnga4Q3UW12 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cnga4Q3UW12 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Gm18057-201ENSMUST00000208220 503 ntBASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cnga4Q3UW12 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.66□□□□□ -0.22
Cnga4Q3UW12 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cnga4Q3UW12 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Mir874-201ENSMUST00000104769 76 ntBASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Gm15678-201ENSMUST00000117573 960 ntBASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.65□□□□□ -0.22
Cnga4Q3UW12 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cnga4Q3UW12 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms