Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Gm15487-201ENSMUST00000122373 465 ntBASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Gm18041-201ENSMUST00000218210 618 ntBASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Brf2Q3UAW9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Brf2Q3UAW9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Brf2Q3UAW9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Brf2Q3UAW9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Brf2Q3UAW9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.71□□□□□ -0.38
Brf2Q3UAW9 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.71□□□□□ -0.38
Brf2Q3UAW9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Brf2Q3UAW9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Brf2Q3UAW9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.7□□□□□ -0.38
Brf2Q3UAW9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms