Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm22331-201ENSMUST00000158066 136 ntBASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.67□□□□□ -0.22
Ebf1Q07802 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm6013-201ENSMUST00000212264 699 ntBASIC13.67□□□□□ -0.22
Ebf1Q07802 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ebf1Q07802 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ebf1Q07802 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ebf1Q07802 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf1Q07802 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ebf1Q07802 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.66□□□□□ -0.22
Ebf1Q07802 Gm16177-201ENSMUST00000120728 718 ntBASIC13.66□□□□□ -0.22
Ebf1Q07802 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.66□□□□□ -0.22
Ebf1Q07802 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.66□□□□□ -0.22
Ebf1Q07802 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.66□□□□□ -0.22
Ebf1Q07802 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.66□□□□□ -0.22
Ebf1Q07802 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ebf1Q07802 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ebf1Q07802 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ebf1Q07802 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ebf1Q07802 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.66□□□□□ -0.22
Ebf1Q07802 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ebf1Q07802 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.66□□□□□ -0.22
Ebf1Q07802 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ebf1Q07802 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Grk6-205ENSMUST00000224653 2976 ntBASIC13.65□□□□□ -0.22
Ebf1Q07802 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf1Q07802 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ebf1Q07802 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.65□□□□□ -0.22
Ebf1Q07802 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Ebf1Q07802 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ebf1Q07802 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.65□□□□□ -0.22
Ebf1Q07802 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.65□□□□□ -0.22
Ebf1Q07802 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.65□□□□□ -0.22
Ebf1Q07802 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.65□□□□□ -0.22
Ebf1Q07802 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ebf1Q07802 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Ebf1Q07802 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ebf1Q07802 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms