Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Gabra1P62812 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Gabra1P62812 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Gabra1P62812 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Gabra1P62812 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Gabra1P62812 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Gabra1P62812 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Gabra1P62812 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Gm9385-201ENSMUST00000117563 472 ntBASIC11.33□□□□□ -0.6
Gabra1P62812 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gabra1P62812 Gm27628-201ENSMUST00000184911 107 ntBASIC11.33□□□□□ -0.6
Gabra1P62812 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.33□□□□□ -0.6
Gabra1P62812 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.33□□□□□ -0.6
Gabra1P62812 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Gabra1P62812 Gm7461-201ENSMUST00000058918 827 ntBASIC11.33□□□□□ -0.6
Gabra1P62812 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.33□□□□□ -0.6
Gabra1P62812 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.33□□□□□ -0.6
Gabra1P62812 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Gabra1P62812 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Gabra1P62812 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Gabra1P62812 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.32□□□□□ -0.6
Gabra1P62812 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.32□□□□□ -0.6
Gabra1P62812 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Gabra1P62812 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Gabra1P62812 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Gm24589-201ENSMUST00000116692 94 ntBASIC11.32□□□□□ -0.6
Gabra1P62812 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.32□□□□□ -0.6
Gabra1P62812 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.32□□□□□ -0.6
Gabra1P62812 Gm28659-201ENSMUST00000188013 759 ntBASIC11.32□□□□□ -0.6
Gabra1P62812 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.32□□□□□ -0.6
Gabra1P62812 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Gm15590-201ENSMUST00000078419 552 ntBASIC11.32□□□□□ -0.6
Gabra1P62812 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Gabra1P62812 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Gabra1P62812 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.32□□□□□ -0.6
Gabra1P62812 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Gabra1P62812 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gabra1P62812 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.31□□□□□ -0.6
Gabra1P62812 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gabra1P62812 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gabra1P62812 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Gabra1P62812 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.31□□□□□ -0.6
Gabra1P62812 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gabra1P62812 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms