Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Vbp1P61759 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Vbp1P61759 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.21□□□□□ -0.45
Vbp1P61759 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.21□□□□□ -0.45
Vbp1P61759 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Gm15957-201ENSMUST00000118893 974 ntBASIC12.21□□□□□ -0.45
Vbp1P61759 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.21□□□□□ -0.45
Vbp1P61759 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.21□□□□□ -0.45
Vbp1P61759 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.21□□□□□ -0.45
Vbp1P61759 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vbp1P61759 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vbp1P61759 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vbp1P61759 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Vbp1P61759 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.21□□□□□ -0.46
Vbp1P61759 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vbp1P61759 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.21□□□□□ -0.46
Vbp1P61759 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.21□□□□□ -0.46
Vbp1P61759 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Vbp1P61759 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vbp1P61759 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vbp1P61759 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vbp1P61759 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.2□□□□□ -0.46
Vbp1P61759 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Vbp1P61759 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Gm16198-201ENSMUST00000118766 670 ntBASIC12.2□□□□□ -0.46
Vbp1P61759 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.2□□□□□ -0.46
Vbp1P61759 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vbp1P61759 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.2□□□□□ -0.46
Vbp1P61759 Gm29741-201ENSMUST00000192667 421 ntBASIC12.2□□□□□ -0.46
Vbp1P61759 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.2□□□□□ -0.46
Vbp1P61759 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Vbp1P61759 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vbp1P61759 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.2□□□□□ -0.46
Vbp1P61759 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vbp1P61759 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.2□□□□□ -0.46
Vbp1P61759 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.2□□□□□ -0.46
Vbp1P61759 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vbp1P61759 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vbp1P61759 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.19□□□□□ -0.46
Vbp1P61759 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.19□□□□□ -0.46
Vbp1P61759 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.19□□□□□ -0.46
Vbp1P61759 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.19□□□□□ -0.46
Vbp1P61759 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.19□□□□□ -0.46
Vbp1P61759 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Vbp1P61759 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vbp1P61759 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vbp1P61759 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.19□□□□□ -0.46
Vbp1P61759 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.19□□□□□ -0.46
Vbp1P61759 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vbp1P61759 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms