Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sox2P48432 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sox2P48432 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.63□□□□□ -0.39
Sox2P48432 Gm9719-201ENSMUST00000162765 543 ntBASIC12.63□□□□□ -0.39
Sox2P48432 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sox2P48432 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.63□□□□□ -0.39
Sox2P48432 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.63□□□□□ -0.39
Sox2P48432 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.63□□□□□ -0.39
Sox2P48432 Dupd1-202ENSMUST00000224735 548 ntBASIC12.63□□□□□ -0.39
Sox2P48432 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sox2P48432 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sox2P48432 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sox2P48432 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Sox2P48432 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.63□□□□□ -0.39
Sox2P48432 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.63□□□□□ -0.39
Sox2P48432 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox2P48432 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox2P48432 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox2P48432 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.62□□□□□ -0.39
Sox2P48432 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.62□□□□□ -0.39
Sox2P48432 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.62□□□□□ -0.39
Sox2P48432 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.62□□□□□ -0.39
Sox2P48432 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox2P48432 Gm18766-201ENSMUST00000189811 808 ntBASIC12.62□□□□□ -0.39
Sox2P48432 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.62□□□□□ -0.39
Sox2P48432 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox2P48432 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Gm10175-201ENSMUST00000086013 645 ntBASIC12.62□□□□□ -0.39
Sox2P48432 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox2P48432 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.62□□□□□ -0.39
Sox2P48432 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.62□□□□□ -0.39
Sox2P48432 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox2P48432 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.61□□□□□ -0.39
Sox2P48432 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.61□□□□□ -0.39
Sox2P48432 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sox2P48432 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox2P48432 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.61□□□□□ -0.39
Sox2P48432 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.61□□□□□ -0.39
Sox2P48432 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.61□□□□□ -0.39
Sox2P48432 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox2P48432 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox2P48432 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Gm18889-201ENSMUST00000174284 929 ntBASIC12.61□□□□□ -0.39
Sox2P48432 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox2P48432 Gm9824-201ENSMUST00000178707 561 ntBASIC12.61□□□□□ -0.39
Sox2P48432 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sox2P48432 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox2P48432 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms