Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.65□□□□□ -0.38
RetP35546 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.65□□□□□ -0.38
RetP35546 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RetP35546 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RetP35546 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RetP35546 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RetP35546 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.65□□□□□ -0.38
RetP35546 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RetP35546 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RetP35546 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RetP35546 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RetP35546 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
RetP35546 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RetP35546 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RetP35546 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.64□□□□□ -0.39
RetP35546 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RetP35546 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
RetP35546 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RetP35546 Gm15678-201ENSMUST00000117573 960 ntBASIC12.64□□□□□ -0.39
RetP35546 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.64□□□□□ -0.39
RetP35546 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.64□□□□□ -0.39
RetP35546 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
RetP35546 Gm27839-201ENSMUST00000184242 106 ntBASIC12.64□□□□□ -0.39
RetP35546 Mir7654-201ENSMUST00000185082 70 ntBASIC12.64□□□□□ -0.39
RetP35546 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.64□□□□□ -0.39
RetP35546 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.64□□□□□ -0.39
RetP35546 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.64□□□□□ -0.39
RetP35546 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RetP35546 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.64□□□□□ -0.39
RetP35546 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RetP35546 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.63□□□□□ -0.39
RetP35546 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RetP35546 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RetP35546 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RetP35546 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RetP35546 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.63□□□□□ -0.39
RetP35546 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.63□□□□□ -0.39
RetP35546 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.63□□□□□ -0.39
RetP35546 Gm18307-201ENSMUST00000206864 949 ntBASIC12.63□□□□□ -0.39
RetP35546 Gm45331-201ENSMUST00000209868 554 ntBASIC12.63□□□□□ -0.39
RetP35546 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.63□□□□□ -0.39
RetP35546 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RetP35546 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.63□□□□□ -0.39
RetP35546 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RetP35546 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms