Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccl6P27784 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccl6P27784 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccl6P27784 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ccl6P27784 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ccl6P27784 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.52□□□□□ -0.73
Ccl6P27784 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccl6P27784 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Ccl6P27784 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ccl6P27784 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ccl6P27784 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccl6P27784 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.52□□□□□ -0.73
Ccl6P27784 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccl6P27784 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl6P27784 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ccl6P27784 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.51□□□□□ -0.73
Ccl6P27784 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ccl6P27784 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.51□□□□□ -0.73
Ccl6P27784 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Ccl6P27784 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.51□□□□□ -0.73
Ccl6P27784 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.51□□□□□ -0.73
Ccl6P27784 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Ccl6P27784 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Mir8102-201ENSMUST00000184148 139 ntBASIC10.51□□□□□ -0.73
Ccl6P27784 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.51□□□□□ -0.73
Ccl6P27784 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.51□□□□□ -0.73
Ccl6P27784 Gm17795-201ENSMUST00000214505 757 ntBASIC10.51□□□□□ -0.73
Ccl6P27784 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.51□□□□□ -0.73
Ccl6P27784 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ccl6P27784 Gm20445-201ENSMUST00000061905 565 ntBASIC10.51□□□□□ -0.73
Ccl6P27784 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ccl6P27784 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccl6P27784 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.51□□□□□ -0.73
Ccl6P27784 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Ccl6P27784 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Ccl6P27784 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl6P27784 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl6P27784 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms