Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.64□□□□□ -0.39
Clk1P22518 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Clk1P22518 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.64□□□□□ -0.39
Clk1P22518 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clk1P22518 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.64□□□□□ -0.39
Clk1P22518 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clk1P22518 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Clk1P22518 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.63□□□□□ -0.39
Clk1P22518 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Clk1P22518 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clk1P22518 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Mir698-201ENSMUST00000102164 109 ntBASIC12.63□□□□□ -0.39
Clk1P22518 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.63□□□□□ -0.39
Clk1P22518 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.63□□□□□ -0.39
Clk1P22518 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Clk1P22518 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.63□□□□□ -0.39
Clk1P22518 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clk1P22518 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.63□□□□□ -0.39
Clk1P22518 Mir8102-201ENSMUST00000184148 139 ntBASIC12.63□□□□□ -0.39
Clk1P22518 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Clk1P22518 Gm43703-201ENSMUST00000200523 763 ntBASIC12.63□□□□□ -0.39
Clk1P22518 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.63□□□□□ -0.39
Clk1P22518 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clk1P22518 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clk1P22518 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.62□□□□□ -0.39
Clk1P22518 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.62□□□□□ -0.39
Clk1P22518 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Gm6912-201ENSMUST00000117218 544 ntBASIC12.62□□□□□ -0.39
Clk1P22518 Gm24420-201ENSMUST00000176676 59 ntBASIC12.62□□□□□ -0.39
Clk1P22518 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.62□□□□□ -0.39
Clk1P22518 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.62□□□□□ -0.39
Clk1P22518 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Clk1P22518 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clk1P22518 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Clk1P22518 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clk1P22518 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.61□□□□□ -0.39
Clk1P22518 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clk1P22518 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.61□□□□□ -0.39
Clk1P22518 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clk1P22518 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms