Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P06344 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P06344 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
P06344 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P06344 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P06344 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.01□□□□□ -0.49
P06344 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P06344 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P06344 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
P06344 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Gm8602-201ENSMUST00000184045 607 ntBASIC12.01□□□□□ -0.49
P06344 Gm18187-201ENSMUST00000196476 984 ntBASIC12.01□□□□□ -0.49
P06344 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.01□□□□□ -0.49
P06344 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P06344 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
P06344 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
P06344 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
P06344 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
P06344 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P06344 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06344 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06344 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Grk6-205ENSMUST00000224653 2976 ntBASIC12□□□□□ -0.49
P06344 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
P06344 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12□□□□□ -0.49
P06344 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P06344 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06344 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06344 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P06344 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Gm12928-201ENSMUST00000117115 573 ntBASIC12□□□□□ -0.49
P06344 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P06344 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P06344 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P06344 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06344 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12□□□□□ -0.49
P06344 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12□□□□□ -0.49
P06344 Gm44397-201ENSMUST00000195950 113 ntBASIC12□□□□□ -0.49
P06344 Gm5276-201ENSMUST00000196683 1047 ntBASIC12□□□□□ -0.49
P06344 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12□□□□□ -0.49
P06344 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12□□□□□ -0.49
P06344 Gm17330-201ENSMUST00000221047 165 ntBASIC12□□□□□ -0.49
P06344 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12□□□□□ -0.49
P06344 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
P06344 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P06344 Gm8775-201ENSMUST00000170943 1327 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms