Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PrnpP04925 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PrnpP04925 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PrnpP04925 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PrnpP04925 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PrnpP04925 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PrnpP04925 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PrnpP04925 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PrnpP04925 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.9□□□□□ -0.18
PrnpP04925 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PrnpP04925 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PrnpP04925 Gm4986-201ENSMUST00000119731 549 ntBASIC13.9□□□□□ -0.18
PrnpP04925 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.9□□□□□ -0.18
PrnpP04925 Gm14381-201ENSMUST00000122105 414 ntBASIC13.9□□□□□ -0.18
PrnpP04925 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PrnpP04925 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Gm6621-201ENSMUST00000193251 772 ntBASIC13.9□□□□□ -0.18
PrnpP04925 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.9□□□□□ -0.18
PrnpP04925 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.9□□□□□ -0.18
PrnpP04925 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.9□□□□□ -0.18
PrnpP04925 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.9□□□□□ -0.18
PrnpP04925 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.9□□□□□ -0.18
PrnpP04925 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PrnpP04925 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PrnpP04925 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.9□□□□□ -0.18
PrnpP04925 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.9□□□□□ -0.18
PrnpP04925 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PrnpP04925 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PrnpP04925 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PrnpP04925 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.89□□□□□ -0.19
PrnpP04925 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.89□□□□□ -0.19
PrnpP04925 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PrnpP04925 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.89□□□□□ -0.19
PrnpP04925 Gm15808-201ENSMUST00000119046 604 ntBASIC13.89□□□□□ -0.19
PrnpP04925 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Gm3890-201ENSMUST00000182416 207 ntBASIC13.89□□□□□ -0.19
PrnpP04925 Gm28693-202ENSMUST00000190758 331 ntBASIC13.89□□□□□ -0.19
PrnpP04925 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.89□□□□□ -0.19
PrnpP04925 Gm37259-201ENSMUST00000193903 849 ntBASIC13.89□□□□□ -0.19
PrnpP04925 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.89□□□□□ -0.19
PrnpP04925 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.89□□□□□ -0.19
PrnpP04925 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.89□□□□□ -0.19
PrnpP04925 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PrnpP04925 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PrnpP04925 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PrnpP04925 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PrnpP04925 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
PrnpP04925 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PrnpP04925 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms