Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chrna4O70174 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chrna4O70174 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chrna4O70174 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chrna4O70174 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chrna4O70174 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chrna4O70174 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.61□□□□□ -0.23
Chrna4O70174 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Chrna4O70174 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Chrna4O70174 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Chrna4O70174 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.61□□□□□ -0.23
Chrna4O70174 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chrna4O70174 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Chrna4O70174 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.61□□□□□ -0.23
Chrna4O70174 Gm5866-201ENSMUST00000177881 973 ntBASIC13.61□□□□□ -0.23
Chrna4O70174 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chrna4O70174 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.61□□□□□ -0.23
Chrna4O70174 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Chrna4O70174 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.61□□□□□ -0.23
Chrna4O70174 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chrna4O70174 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chrna4O70174 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chrna4O70174 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chrna4O70174 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Chrna4O70174 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Gm12341-201ENSMUST00000119724 503 ntBASIC13.6□□□□□ -0.23
Chrna4O70174 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Chrna4O70174 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.6□□□□□ -0.23
Chrna4O70174 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.6□□□□□ -0.23
Chrna4O70174 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Chrna4O70174 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chrna4O70174 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.6□□□□□ -0.23
Chrna4O70174 Gm19220-201ENSMUST00000222682 803 ntBASIC13.6□□□□□ -0.23
Chrna4O70174 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.6□□□□□ -0.23
Chrna4O70174 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chrna4O70174 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Chrna4O70174 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chrna4O70174 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chrna4O70174 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.59□□□□□ -0.23
Chrna4O70174 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Chrna4O70174 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chrna4O70174 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chrna4O70174 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chrna4O70174 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.59□□□□□ -0.23
Chrna4O70174 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms