Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
NlkO54949 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
NlkO54949 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
NlkO54949 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
NlkO54949 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NlkO54949 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.06□□□□□ -0.48
NlkO54949 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Gm25287-201ENSMUST00000103846 110 ntBASIC12.06□□□□□ -0.48
NlkO54949 Gm22918-201ENSMUST00000103855 110 ntBASIC12.06□□□□□ -0.48
NlkO54949 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.06□□□□□ -0.48
NlkO54949 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.06□□□□□ -0.48
NlkO54949 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.06□□□□□ -0.48
NlkO54949 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
NlkO54949 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.06□□□□□ -0.48
NlkO54949 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.06□□□□□ -0.48
NlkO54949 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NlkO54949 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NlkO54949 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.06□□□□□ -0.48
NlkO54949 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NlkO54949 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NlkO54949 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
NlkO54949 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NlkO54949 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.05□□□□□ -0.48
NlkO54949 Gm10275-202ENSMUST00000168697 495 ntBASIC12.05□□□□□ -0.48
NlkO54949 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.05□□□□□ -0.48
NlkO54949 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.05□□□□□ -0.48
NlkO54949 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Gm9824-201ENSMUST00000178707 561 ntBASIC12.05□□□□□ -0.48
NlkO54949 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.05□□□□□ -0.48
NlkO54949 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Gm43474-201ENSMUST00000196415 774 ntBASIC12.05□□□□□ -0.48
NlkO54949 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.05□□□□□ -0.48
NlkO54949 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NlkO54949 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Gm10275-201ENSMUST00000092620 635 ntBASIC12.05□□□□□ -0.48
NlkO54949 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NlkO54949 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.05□□□□□ -0.48
NlkO54949 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NlkO54949 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.05□□□□□ -0.48
NlkO54949 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NlkO54949 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NlkO54949 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms