Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Gm15376-201ENSMUST00000122258 783 ntBASIC12.69□□□□□ -0.38
Cx3cl1O35188 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.69□□□□□ -0.38
Cx3cl1O35188 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.68□□□□□ -0.38
Cx3cl1O35188 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Gm15770-201ENSMUST00000117498 584 ntBASIC12.68□□□□□ -0.38
Cx3cl1O35188 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Mir7654-201ENSMUST00000185082 70 ntBASIC12.68□□□□□ -0.38
Cx3cl1O35188 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.68□□□□□ -0.38
Cx3cl1O35188 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Gm8515-201ENSMUST00000194852 576 ntBASIC12.68□□□□□ -0.38
Cx3cl1O35188 Gm18307-201ENSMUST00000206864 949 ntBASIC12.68□□□□□ -0.38
Cx3cl1O35188 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.68□□□□□ -0.38
Cx3cl1O35188 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.68□□□□□ -0.38
Cx3cl1O35188 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cx3cl1O35188 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.67□□□□□ -0.38
Cx3cl1O35188 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm12091-201ENSMUST00000146791 830 ntBASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm23984-201ENSMUST00000157139 203 ntBASIC12.67□□□□□ -0.38
Cx3cl1O35188 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.67□□□□□ -0.38
Cx3cl1O35188 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cx3cl1O35188 Gm6180-201ENSMUST00000065243 498 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms