Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm23616-201ENSMUST00000177797 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm25871-201ENSMUST00000177816 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm24752-201ENSMUST00000178240 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm24496-201ENSMUST00000178287 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm25649-201ENSMUST00000178476 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm25548-201ENSMUST00000178681 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm23147-201ENSMUST00000178841 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm26095-201ENSMUST00000179270 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm22171-201ENSMUST00000179283 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm23936-201ENSMUST00000179354 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm22619-201ENSMUST00000179516 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm25255-201ENSMUST00000179579 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm24755-201ENSMUST00000179691 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm26506-201ENSMUST00000179692 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm25086-201ENSMUST00000179931 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm23243-201ENSMUST00000180047 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm24659-201ENSMUST00000180212 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm24169-201ENSMUST00000180244 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm23689-201ENSMUST00000180354 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Gm27359-201ENSMUST00000184153 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm27785-201ENSMUST00000184268 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm27466-201ENSMUST00000184396 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm27703-201ENSMUST00000184836 110 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm43514-201ENSMUST00000198852 424 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm45841-201ENSMUST00000207700 164 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.04□□□□□ -0.48
Alx4O35137 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Alx4O35137 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Alx4O35137 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Alx4O35137 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Alx4O35137 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.04□□□□□ -0.48
Alx4O35137 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.03□□□□□ -0.48
Alx4O35137 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Alx4O35137 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Alx4O35137 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.03□□□□□ -0.48
Alx4O35137 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Alx4O35137 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.03□□□□□ -0.48
Alx4O35137 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.03□□□□□ -0.48
Alx4O35137 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.03□□□□□ -0.48
Alx4O35137 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.03□□□□□ -0.48
Alx4O35137 Gm43125-201ENSMUST00000201724 730 ntBASIC12.03□□□□□ -0.48
Alx4O35137 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.03□□□□□ -0.48
Alx4O35137 Gm9229-201ENSMUST00000222777 126 ntBASIC12.03□□□□□ -0.48
Alx4O35137 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Alx4O35137 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.03□□□□□ -0.48
Alx4O35137 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Alx4O35137 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Alx4O35137 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Alx4O35137 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.02□□□□□ -0.48
Alx4O35137 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Alx4O35137 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Alx4O35137 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms