Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Gm10553J3QPF1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.3□□□□□ -0.76
Gm10553J3QPF1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gm42550-201ENSMUST00000201553 960 ntBASIC10.3□□□□□ -0.76
Gm10553J3QPF1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Gm10553J3QPF1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gm15429-201ENSMUST00000151268 798 ntBASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gm27701-201ENSMUST00000184498 110 ntBASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gm24447-201ENSMUST00000083977 338 ntBASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Gm10553J3QPF1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10553J3QPF1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10553J3QPF1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.28□□□□□ -0.76
Gm10553J3QPF1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm10553J3QPF1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms