Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gm25144-201ENSMUST00000179561 110 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gm25352-201ENSMUST00000179815 110 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gm21470-201ENSMUST00000187680 696 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gm9229-201ENSMUST00000222777 126 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav5-4A0A075B652 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Mir698-201ENSMUST00000102164 109 ntBASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5-4A0A075B652 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Gm22175-201ENSMUST00000175007 78 ntBASIC11.31□□□□□ -0.6
Trav5-4A0A075B652 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms