Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a4Q9QZR9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm23949-201ENSMUST00000104027 127 ntBASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm12015-201ENSMUST00000117065 843 ntBASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm4607-201ENSMUST00000206649 577 ntBASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a4Q9QZR9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Gm23251-201ENSMUST00000103773 110 ntBASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Gm14460-201ENSMUST00000121511 639 ntBASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Gm43962-201ENSMUST00000203898 190 ntBASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Gm10076-201ENSMUST00000073238 384 ntBASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col4a4Q9QZR9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms