Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Gm12928-201ENSMUST00000117115 573 ntBASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Gm5687-201ENSMUST00000118252 640 ntBASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Gm45841-201ENSMUST00000207700 164 ntBASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Gm12138-201ENSMUST00000122180 951 ntBASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Gm9794-201ENSMUST00000202370 423 ntBASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3aQ9JKX8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Acot6-202ENSMUST00000222921 3622 ntBASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Gm12490-201ENSMUST00000120255 560 ntBASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Gm11918-201ENSMUST00000121660 179 ntBASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3aQ9JKX8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms