Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Gm15678-201ENSMUST00000117573 960 ntBASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Gm38144-201ENSMUST00000192790 465 ntBASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ldb3Q9JKS4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ldb3Q9JKS4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Gm38223-201ENSMUST00000194484 695 ntBASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Gm18018-201ENSMUST00000198273 408 ntBASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Gm42550-201ENSMUST00000201553 960 ntBASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ldb3Q9JKS4 Gm6180-201ENSMUST00000065243 498 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms