Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gm6447-201ENSMUST00000118905 835 ntBASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gm13570-201ENSMUST00000140763 309 ntBASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gm15276-201ENSMUST00000145953 498 ntBASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gm38317-201ENSMUST00000195564 343 ntBASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Gm23270-201ENSMUST00000104055 131 ntBASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-4Q9EQM3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-4Q9EQM3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-4Q9EQM3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-4Q9EQM3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-4Q9EQM3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-4Q9EQM3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-4Q9EQM3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-4Q9EQM3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Gm11331-201ENSMUST00000119764 288 ntBASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Gm8584-201ENSMUST00000171982 758 ntBASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.77□□□□□ -0.21
Nkx2-4Q9EQM3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms