Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.02□□□□□ -0.17
Lysmd3Q99LE3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd3Q99LE3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Gm38577-201ENSMUST00000221531 4545 ntBASIC14□□□□□ -0.17
Lysmd3Q99LE3 Gm9947-201ENSMUST00000067599 2920 ntBASIC14□□□□□ -0.17
Lysmd3Q99LE3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Gm4984-201ENSMUST00000115987 360 ntBASIC14□□□□□ -0.17
Lysmd3Q99LE3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Gm27486-201ENSMUST00000184923 80 ntBASIC14□□□□□ -0.17
Lysmd3Q99LE3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Gm38671-201ENSMUST00000200573 130 ntBASIC14□□□□□ -0.17
Lysmd3Q99LE3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Gm43364-201ENSMUST00000196046 3274 ntBASIC14□□□□□ -0.17
Lysmd3Q99LE3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd3Q99LE3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gm13612-201ENSMUST00000119276 390 ntBASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gm13829-201ENSMUST00000119600 138 ntBASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gm18473-201ENSMUST00000220543 868 ntBASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms