Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 AC162934.3-201ENSMUST00000223015 841 ntBASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb20Q91XZ9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gm33571-201ENSMUST00000193271 657 ntBASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gm38233-201ENSMUST00000194259 807 ntBASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 AC132384.4-201ENSMUST00000220343 1397 ntBASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb20Q91XZ9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm14746-201ENSMUST00000120309 741 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm8215-201ENSMUST00000120627 990 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm27005-201ENSMUST00000182783 921 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm28934-201ENSMUST00000186491 346 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm42612-201ENSMUST00000197986 623 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm43170-201ENSMUST00000199827 612 ntBASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb20Q91XZ9 Gm7684-201ENSMUST00000211891 829 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms