Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ndc1Q8VCB1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Gm12928-201ENSMUST00000117115 573 ntBASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Gm8463-201ENSMUST00000208573 613 ntBASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ndc1Q8VCB1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ndc1Q8VCB1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms