Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.65□□□□□ -0.22
Slf1Q8R3P9 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slf1Q8R3P9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Slf1Q8R3P9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Slf1Q8R3P9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Slf1Q8R3P9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Slf1Q8R3P9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Gm2445-201ENSMUST00000182798 989 ntBASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slf1Q8R3P9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms