Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.76□□□□□ -0.37
Clrn1Q8K445 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.75□□□□□ -0.37
Clrn1Q8K445 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.75□□□□□ -0.37
Clrn1Q8K445 Gm12485-201ENSMUST00000119641 291 ntBASIC12.75□□□□□ -0.37
Clrn1Q8K445 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.75□□□□□ -0.37
Clrn1Q8K445 Gm43094-201ENSMUST00000196549 921 ntBASIC12.75□□□□□ -0.37
Clrn1Q8K445 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Clrn1Q8K445 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn1Q8K445 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.74□□□□□ -0.37
Clrn1Q8K445 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Gm5866-201ENSMUST00000177881 973 ntBASIC12.74□□□□□ -0.37
Clrn1Q8K445 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clrn1Q8K445 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clrn1Q8K445 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms