Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Cps1Q8C196 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.81■□□□□ 0.44
Cps1Q8C196 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC17.81■□□□□ 0.44
Cps1Q8C196 Gm8546-201ENSMUST00000178288 1264 ntBASIC17.81■□□□□ 0.44
Cps1Q8C196 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cps1Q8C196 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cps1Q8C196 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.8■□□□□ 0.44
Cps1Q8C196 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.8■□□□□ 0.44
Cps1Q8C196 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Cps1Q8C196 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cps1Q8C196 Gm12058-201ENSMUST00000118614 437 ntBASIC17.8■□□□□ 0.44
Cps1Q8C196 Gm11331-201ENSMUST00000119764 288 ntBASIC17.8■□□□□ 0.44
Cps1Q8C196 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC17.8■□□□□ 0.44
Cps1Q8C196 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cps1Q8C196 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cps1Q8C196 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cps1Q8C196 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cps1Q8C196 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Cps1Q8C196 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cps1Q8C196 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.79■□□□□ 0.44
Cps1Q8C196 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
Cps1Q8C196 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC17.79■□□□□ 0.44
Cps1Q8C196 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC17.79■□□□□ 0.44
Cps1Q8C196 Gm24749-201ENSMUST00000157838 343 ntBASIC17.79■□□□□ 0.44
Cps1Q8C196 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC17.79■□□□□ 0.44
Cps1Q8C196 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC17.79■□□□□ 0.44
Cps1Q8C196 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC17.79■□□□□ 0.44
Cps1Q8C196 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC17.79■□□□□ 0.44
Cps1Q8C196 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.79■□□□□ 0.44
Cps1Q8C196 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cps1Q8C196 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cps1Q8C196 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cps1Q8C196 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.78■□□□□ 0.44
Cps1Q8C196 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC17.78■□□□□ 0.44
Cps1Q8C196 Gm39404-201ENSMUST00000216350 313 ntBASIC17.78■□□□□ 0.44
Cps1Q8C196 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC17.78■□□□□ 0.44
Cps1Q8C196 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.78■□□□□ 0.44
Cps1Q8C196 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cps1Q8C196 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cps1Q8C196 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cps1Q8C196 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms