Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trub1Q8C0D0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Gm5354-201ENSMUST00000182417 973 ntBASIC13.93□□□□□ -0.18
Trub1Q8C0D0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Gm44855-201ENSMUST00000205725 362 ntBASIC13.93□□□□□ -0.18
Trub1Q8C0D0 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.93□□□□□ -0.18
Trub1Q8C0D0 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trub1Q8C0D0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Gm18041-201ENSMUST00000218210 618 ntBASIC13.92□□□□□ -0.18
Trub1Q8C0D0 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trub1Q8C0D0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms