Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.82□□□□□ -0.2
Nup54Q8BTS4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Itm2b-204ENSMUST00000228637 783 ntBASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup54Q8BTS4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Gm13612-201ENSMUST00000119276 390 ntBASIC13.8□□□□□ -0.2
Nup54Q8BTS4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Gm6152-201ENSMUST00000151704 340 ntBASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Gm38671-201ENSMUST00000200573 130 ntBASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup54Q8BTS4 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup54Q8BTS4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms