Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Gm27920-201ENSMUST00000183953 96 ntBASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.12□□□□□ -0.63
Smco3Q8BQM7 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.12□□□□□ -0.63
Smco3Q8BQM7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smco3Q8BQM7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.11□□□□□ -0.63
Smco3Q8BQM7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Gm27628-201ENSMUST00000184911 107 ntBASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smco3Q8BQM7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Gm5177-201ENSMUST00000183092 997 ntBASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Smco3Q8BQM7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms