Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smndc1Q8BGT7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smndc1Q8BGT7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smndc1Q8BGT7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smndc1Q8BGT7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Gm13464-201ENSMUST00000119418 935 ntBASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smndc1Q8BGT7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Gm15920-201ENSMUST00000118998 402 ntBASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Gm43474-201ENSMUST00000196415 774 ntBASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smndc1Q8BGT7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms