Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trnp1Q80ZI1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Gm11930-201ENSMUST00000117788 190 ntBASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Mir6927-201ENSMUST00000184494 71 ntBASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trnp1Q80ZI1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Gm25214-201ENSMUST00000104573 129 ntBASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trnp1Q80ZI1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trnp1Q80ZI1 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.08■□□□□ 0.01
Trnp1Q80ZI1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trnp1Q80ZI1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.08■□□□□ 0.01
Trnp1Q80ZI1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trnp1Q80ZI1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trnp1Q80ZI1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Gm13461-201ENSMUST00000120980 662 ntBASIC15.08■□□□□ 0
Trnp1Q80ZI1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Gm5523-201ENSMUST00000180415 997 ntBASIC15.08■□□□□ 0
Trnp1Q80ZI1 Gm2546-201ENSMUST00000182630 991 ntBASIC15.08■□□□□ 0
Trnp1Q80ZI1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.08■□□□□ 0
Trnp1Q80ZI1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.08■□□□□ 0
Trnp1Q80ZI1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trnp1Q80ZI1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms