Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.89□□□□□ -0.51
Negr1Q80Z24 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Negr1Q80Z24 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.88□□□□□ -0.51
Negr1Q80Z24 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.88□□□□□ -0.51
Negr1Q80Z24 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.88□□□□□ -0.51
Negr1Q80Z24 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Negr1Q80Z24 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.87□□□□□ -0.51
Negr1Q80Z24 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.87□□□□□ -0.51
Negr1Q80Z24 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm22189-201ENSMUST00000103822 86 ntBASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm16215-201ENSMUST00000161990 637 ntBASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm27772-201ENSMUST00000184900 187 ntBASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm28760-201ENSMUST00000185995 736 ntBASIC11.87□□□□□ -0.51
Negr1Q80Z24 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Negr1Q80Z24 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.87□□□□□ -0.51
Negr1Q80Z24 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.87□□□□□ -0.51
Negr1Q80Z24 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Negr1Q80Z24 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms