Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm14719-201ENSMUST00000121891 340 ntBASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gm24694-201ENSMUST00000180054 110 ntBASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gm27663-201ENSMUST00000184839 110 ntBASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Mir7023-201ENSMUST00000185093 64 ntBASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gm17330-201ENSMUST00000221047 165 ntBASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim38Q5SZ99 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim38Q5SZ99 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Gm29667-201ENSMUST00000190817 490 ntBASIC14.02□□□□□ -0.17
Trim38Q5SZ99 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim38Q5SZ99 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim38Q5SZ99 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim38Q5SZ99 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14□□□□□ -0.17
Trim38Q5SZ99 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14□□□□□ -0.17
Trim38Q5SZ99 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim38Q5SZ99 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim38Q5SZ99 Gm4782-201ENSMUST00000168705 2046 ntBASIC14□□□□□ -0.17
Trim38Q5SZ99 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms